Tcells | Myeloid | Stromal | Treg | CD4 Tcells | CD8 Tcells | Monocytes | Macrophages | cDC2 | cDC1 |
---|---|---|---|---|---|---|---|---|---|
High | High | Low | Variable | Low | High | Variable | Very High | Low | High |
Chronic inflamation in CD8 Tcells Macrophages sustained by IFN signaling
Chronic viral infection
IFN/CSF1 Signalling
CXCL9, CXCL11, CXCL12, CXCR3, CXCR4, XCL1, XCL2, XCR1
Type 1 Immunity (M1 and Th1), High in Nk cells, High Exhaustion, IFN/TNFa signalling, PD1-PDL1/2
Immune Archetype Gene Signature
Table of Archetype Feature Scores
Table of Archetype Feature flow Populations
Table of Archetype NON FEATURE flow Populations
ADC = Adenocarcinoma NOS PSC = Papillary Serous Cystadenocarcinoma PC = Papillary Carcinoma SCC = Squamous Cell Carcinoma CCC = Clear Cell Carcinoma NOS EA = Endometriod Adenocarcinoma BS = Benign schwannoma
Sample | Gender | Race | Ethnicity | BMI | Age | T Stage | N Stage | M Stage | Grade | Histology | Tumor type | Extraction Site |
---|---|---|---|---|---|---|---|---|---|---|---|---|
IPICRC058.T1 | Female | White | Non His/Lat | 30.04 | 88 | 3 | 0 | 0 | G2 | ADC | Local Recurrence | colon |
IPICRC062.T1 | Female | White | Non His/Lat | 30.43 | 86 | 3 | 0 | 0 | G1 | ADC | Primary | colon |
IPICRC089.T1 | Male | White | Non His/Lat | 21.47 | 40 | NA | NA | NA | NA | BS | Primary | retroperitoneum |
IPIGYN084.T1 | Female | White | Non His/Lat | 26.99 | 75 | 3a | X | G3 | PSC | Primary | abdominal wall | |
IPIGYN100.T1 | Female | Other | His/Lat | 41 | 53 | 1a | 0 | G1 | EA | Primary | uterus | |
IPIKID027.T1 | Male | White | Non His/Lat | 29 | 79 | 3a | X | G2 | CCC | Primary | right kidney | |
IPIKID030.T1 | Male | Other | His/Lat | 28.8 | 59 | 3a | X | G3 | CCC | Primary | right kidney | |
IPIKID043.T1 | Male | White | Non His/Lat | 25.9 | 79 | 2a | 1 | G3 | PC | Primary | right kidney | |
IPIKID047.T1 | Female | White | Non His/Lat | 22.4 | 73 | 3a | X | GX | Other | Primary | right kidney | |
IPIKID048.T1 | Female | Asian | Non His/Lat | 27.5 | 59 | 4 | 1 | G4 | CCC | Primary | right kidney | |
IPIKID050.T1 | Male | White | Non His/Lat | 22.9 | 89 | 4 | X | G3 | PC | Primary | right kidney | |
IPIKID051.T1 | Male | White | Non His/Lat | 27.3 | 63 | 3b | 0 | X | G4 | CCC | Primary | right kidney |
IPIKID066.T1 | Male | White | Non His/Lat | 41 | 68 | 2a | X | G3 | CCC | Primary | right kidney | |
IPIKID074.T1 | Male | White | Non His/Lat | 28 | 68 | 3a | X | G3 | CCC | Primary | right kidney | |
IPIKID076.T1 | Male | White | Non His/Lat | 26 | 68 | 3a | 0 | G4 | CCC | Primary | right kidney | |
IPIKID078.T1 | Male | Asian | Non His/Lat | 33 | 63 | 3a | 0 | G4 | CCC | Primary | right kidney | |
IPIKID079.T1 | Male | White | Non His/Lat | 32 | 73 | 1a | X | G1 | PC | Primary | right kidney | |
IPIKID083.T1 | Male | Asian | Non His/Lat | 25 | 42 | 2a | 0 | G3 | CCC | Primary | left kidney | |
IPIKID084.T1 | Female | White | Non His/Lat | 41 | 49 | 2a | X | GX | CCC | Primary | kidney | |
IPIKID086.T1 | Male | White | Non His/Lat | 34 | 69 | 3a | 0 | G3 | CCC | Primary | left kidney | |
IPIKID091.T1 | Male | White | Non His/Lat | 28 | 74 | 3a | X | G4 | CCC | Primary | right kidney | |
IPIKID092.T1 | Male | Other | Non His/Lat | 35 | 64 | 3a | X | G4 | CCC | Primary | right kidney | |
IPIKID093.T1 | Female | Other | Non His/Lat | 36 | 65 | 3a | 0 | G3 | CCC | Primary | right kidney | |
IPIKID099.T1 | Male | White | Non His/Lat | 25 | 55 | 1a | X | G3 | CCC | Primary | left kidney | |
IPIKID100.T1 | Female | Asian | His/Lat | 30 | 79 | 3b | X | G2 | CCC | Primary | right kidney | |
IPIKID102.T1 | Male | Other | His/Lat | 29.8 | 60 | 3b | 0 | G2 | CCC | Primary | right kidney | |
IPILUNG006.T1 | Female | Asian | Non His/Lat | 24 | 66 | 1a | 0 | G2 | ADC | Primary | right lung | |
IPILUNG031.T1 | Male | Asian | Non His/Lat | 22 | 60 | 2b | 2 | GX | SCC | Primary | right lung | |
IPIMELB002.T1 | Female | Other | Not reported | 20 | 76 | NA | NA | NA | NA | NA | Metastasis | Pancreas |